Please use this identifier to cite or link to this item: https://hdl.handle.net/10216/91721
Author(s): Nuno M. Garrido
Miguel Jorge
António J. Queimada
Ioannis G. Economou
Eugénia A. Macedo
Title: Molecular simulation of the hydration Gibbs energy of barbiturates
Issue Date: 2010
Abstract: In the present work, molecular dynamics calculations of the Gibbs energy of hydration of 10 different substituted barbiturates in SPC/E water were performed using thermodynamic integration. Given that experimental determination of the Gibbs hydration energy for this class of compounds is currently unfeasible, computer simulations appear as the only alternative for the estimation of this important quantity. Several simulation parameters are discussed and optimized based on calculations for barbituric acid. It is concluded that accounting for electrostatic interactions with the Reaction-Field method can be up to two times faster than with Particle-Mesh-Ewald method, without loss of accuracy. Different number of solvent molecules and simulation lengths were also tested. Lennard-Jones and electrostatic contributions were scaled down to zero in an independent way. It is shown that the electrostatic contribution is dominant (representing approximately 90% of the total Gibbs energy of hydration) and that barbiturate intra-molecular interactions cannot be neglected. The importance of the electrostatic contribution is attributed to the formation of hydrogen bonds between the barbiturates and water, which play an important role in the solvation process. The influence of the different substituents and their contribution to the Gibbs energy of hydration was assessed. Finally, the Lennard-Jones contributions and the total hydration Gibbs energy can both be correlated against molecular weight or partition coefficient data for mono- and di-substituted barbiturates.
Subject: Química molecular, Engenharia química
Molecular chemistry, Chemical engineering
Scientific areas: Ciências da engenharia e tecnologias::Engenharia química
Engineering and technology::Chemical engineering
URI: https://repositorio-aberto.up.pt/handle/10216/91721
Document Type: Artigo em Revista Científica Internacional
Rights: restrictedAccess
Appears in Collections:FEUP - Artigo em Revista Científica Internacional

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