Supplementary Data 3 Supplementary Data 3.1 U8 mitogenomes included in the phylogenetic and phylogeographic analysis. Sequence iD MtDNA haplogroup Region Country/Ethnicity GenBank ID References HM852886 K South Caucasus Georgia HM852886 [10] JQ702852 K1 Europe Britain JQ702852 [3] EU616820 K1a – – EU616820 [14] JQ705445 K1a – – JQ705445 [3] JQ705288 K1a – – JQ705288 [3] JQ706033 K1a – – JQ706033 [3] JQ703051 K1a – – JQ703051 [3] JQ702070 K1a – – JQ702070 [3] JQ703267 K1a – – JQ703267 [3] JQ705733 K1a – – JQ705733 [3] JQ705731 K1a – – JQ705731 [3] JQ702273 K1a – – JQ702273 [3] JQ705751 K1a – – JQ705751 [3] JQ702266 K1a – – JQ702266 [3] JQ702541 K1a – – JQ702541 [3] JQ703463 K1a – – JQ703463 [3] JQ706037 K1a Eastern Africa Ethiopia JQ706037 [3] JQ706027 K1a Europe Albania JQ706027 [3] HM852762 K1a South Caucasus Armenia HM852762 [10] JQ702854 K1a Europe Britain JQ702854 [3] JQ703133 K1a Europe Britain JQ703133 [3] EF657766 K1a Europe Europe EF657766 [12]a; [11]b HM625695 K1a Europe Europe HM625695 [20] JQ703100 K1a Europe France JQ703100 [3] JQ705750 K1a Europe France JQ705750 [3] JQ705705 K1a Europe France JQ705705 [3] JQ706038 K1a Europe France JQ706038 [3] JQ702365 K1a Europe Germany JQ702365 [3] FJ348175 K1a Europe Hutterite FJ348175 [24] FJ348187 K1a Europe Hutterite FJ348187 [24] EF177412 K1a Europe Iberia EF177412 [22] JQ703486 K1a Europe Ireland JQ703486 [3] JQ705776 K1a Europe Ireland JQ705776 [3] JQ703006 K1a Europe Ireland JQ703006 [3] K72 K1a Europe Italy KC878720 [2] JQ705476 K1a Europe Italy JQ705476 [3] JQ703255 K1a Europe Italy JQ703255 [3] EF660912 K1a Europe Italy EF660912 [33] NA20764 K1a Europe Italy NA20764 [9] GU471243 K1a Europe Portugal, Azores GU471243 [7] JQ704907 K1a Europe Scotland JQ704907 [3] JQ704663 K1a Europe Scotland JQ704663 [3] JQ706060 K1a Europe Slovakia JQ706060 [3] JQ702517 K1a Europe Spain JQ702517 [3] JQ705901 K1a Europe Sweden JQ705901 [3] K64 K1a Near East Anatolia, Turkey KC878710 [2] K65 K1a Near East Anatolia, Turkey KC878711 [2] K71 K1a Near East Anatolia, Turkey KC878709 [2] JQ706031 K1a Near East Cyprus JQ706031 [3] JQ706049 K1a Near East Kuwait JQ706049 [3] HM043706 K1a Near East Lebanon HM043706 [7] JQ706056 K1a Near East Saudi Arabia JQ706056 [3] FJ460541 K1a North Africa Tunisia FJ460541 [31] JQ706053 K1a North Caucasus North Caucasus - Lezgin JQ706053 [3] JF893456 K1a South Caucasus Armenia JF893456 [15] GU471244 K1a USA USA GU471244 [7] EU259093 K1a1 – – EU259093 [13] JQ705773 K1a1 Europe Italy JQ705773 [3] K54 K1a1 Europe Russia JX273286 [2] EU232008 K1a10 – – EU232008 [13] JQ702740 K1a10 Europe Britain JQ702740 [3] JQ703005 K1a10 Europe Ireland JQ703005 [3] EF485042 K1a10a – – EF485042 [13] JQ704187 K1a10a – – JQ704187 [3] JQ702276 K1a10a – – JQ702276 [3] JQ704537 K1a10a – – JQ704537 [3] HQ287881 K1a10a Canada Newfoundland HQ287881 [32] JQ702872 K1a10a Europe Britain JQ702872 [3] JQ704508 K1a10a Europe Britain JQ704508 [3] EU170361 K1a10a Europe Ireland EU170361 [13] JQ704582 K1a10a Europe Ireland JQ704582 [3] GU004259 K1a10a Europe Ireland GU004259 [6] JX415317 K1a10a Europe Ireland JX415317 [8] JQ703281 K1a10a Europe Norway JQ703281 [3] JX535003 K1a10a Europe Scotland JX535003 [8] JQ703764 K1a10a Europe Sweden JQ703764 [3] HM575425 K1a10a Europe Sweden HM575425 [7] HM054058 K1a10a USA USA HM054058 [7] JX193906 K1a11 – – JX193906 [34] JQ705747 K1a11 Europe Denmark JQ705747 [3] JQ705523 K1a11 Europe England JQ705523 [3] EF657354 K1a11 Europe Europe EF657354 [12]a; [11]b JQ702675 K1a11a – – JQ702675 [3] JN657206 K1a11a Europe Germany JN657206 [15] JQ703607 K1a11a Europe Germany JQ703607 [3] JX679248 K1a11a1 – – JX679248 [8] JQ705336 K1a11a1 Europe Switzerland JQ705336 [3] GU332639 K1a11a1 USA USA GU332639 [6] EU603402 K1a11b – – EU603402 [14] EU523125 K1a11b – – EU523125 [14] EU623472 K1a11b – – EU623472 [14] JQ703323 K1a12 – – JQ703323 [3] EF660932 K1a12 Europe Italy EF660932 [33] GQ149510 K1a12a – – GQ149510 [6] JQ703711 K1a12a Europe Italy JQ703711 [3] EU600362 K1a12a Near East Druze EU600362 [23] EU600363 K1a12a Near East Druze EU600363 [23] EU600364 K1a12a Near East Druze EU600364 [23] K26 K1a12a Near East Israel, Druze JX273259 [2] JQ706050 K1a12a Near East Kuwait JQ706050 [3] K63 K1a12a North Caucasus North Ossetian KC878719   [2] K27 K1a12a North Caucasus Russia, North Ossetian JX273283 [2] JQ706036 K1a12a1 Eastern Africa Ethiopia JQ706036 [3] JQ706035 K1a12a1 Eastern Africa Ethiopia JQ706035 [3] K62 K1a12a1a Near East Anatolia, Turkey KC878712 [2] K25 K1a12a1a Near East Anatolia, Turkey JX273265 [2] JQ706065 K1a12a1a Near East Turkey JQ706065 [3] JQ706066 K1a12a1a Near East Turkey JQ706066 [3] FJ460551 K1a12b North Africa Tunisia FJ460551 [31] FJ460554 K1a12b North Africa Tunisia FJ460554 [31] JQ702796 K1a13 – – JQ702796 [3] K60 K1a13 Europe France KC878721 [2] JQ702193 K1a13 Europe France JQ702193 [3] JQ703526 K1a13 Europe France JQ703526 [3] JQ706030 K1a13a – – JQ706030 [3] JQ705537 K1a13a – – JQ705537 [3] JN202723 K1a13a Europe Croatia JN202723 [15] JQ702991 K1a13a Europe Ireland JQ702991 [3] JQ704548 K1a13a Europe Spain JQ704548 [3] GU944475 K1a13a USA USA GU944475 [7] JQ702947 K1a15 Europe England JQ702947 [3] JQ702674 K1a15 Europe Ireland JQ702674 [3] JQ703285 K1a15 Europe Ireland JQ703285 [3] JQ703379 K1a15 Europe Scotland JQ703379 [3] JQ702931 K1a16 – – JQ702931 [3] JQ703365 K1a16 – – JQ703365 [3] JQ702271 K1a16 Europe Britain JQ702271 [3] EF657745 K1a16 Europe Europe EF657745 [12]a; [11]b JQ704062 K1a16 Europe Scotland JQ704062 [3] JQ706034 K1a17 North Africa Egypt JQ706034 [3] EU600361 K1a17a Near East Druze EU600361 [23] JQ706064 K1a17a Near East Turkey JQ706064 [3] EU600365 K1a18 Near East Druze EU600365 [23] JQ706048 K1a18 Near East Kuwait JQ706048 [3] JQ706054 K1a18 Near East Saudi Arabia JQ706054 [3] JQ308836 K1a19 – – JQ308836 [15] JQ706058 K1a19 Europe Italy JQ706058 [3] JQ706040 K1a19 Near East Iran JQ706040 [3] K19 K1a19 Near East Anatolia, Turkey JX273264 [2] K20 K1a19 Near East Anatolia, Turkey, Kurd JX273291 [2] JQ702166 K1a1a Europe Britain JQ702166 [3] JQ702802 K1a1a Europe Finland JQ702802 [3] JQ705483 K1a1a Europe Ireland JQ705483 [3] EU677845 K1a1a Europe Switzerland EU677845 [14] HM590878 K1a1a USA USA HM590878 [7] EF449506 K1a1a1 – – EF449506 [13] EF657754 K1a1a1 Europe Europe EF657754 [12]a; [11]b FJ348183 K1a1a1 Europe Hutterite FJ348183 [24] GU722598 K1a1a1 USA USA GU722598 [35] JQ704696 K1a1a2 Europe Britain JQ704696 [3] GU980957 K1a1a2a Europe Czech Republic GU980957 [7] JQ703160 K1a1a2a Europe Germany JQ703160 [3] JQ705393 K1a1a2a1 Europe Slovakia JQ705393 [3] JQ702869 K1a1a2a1 Europe Slovakia JQ702869 [3] AY495257 K1a1a2a1 USA USA AY495257 [16] JN048471 K1a1b South Caucasus Armenia JN048471 [15] JQ668027 K1a1b1 – – JQ668027 [8] DQ200804 K1a1b1 Europe Basque DQ200804 [1] JX275889 K1a1b1 Europe England JX275889 [8] JQ702781 K1a1b1 Europe Germany JQ702781 [3] FJ348218 K1a1b1 Europe Hutterite FJ348218 [24] NA20813 K1a1b1 Europe Italy NA20813 [9] NA20539 K1a1b1 Europe Italy NA20539 [9] DQ301798 K1a1b1a Jewish Ashkenazi Jew DQ301798 [11] EU052292 K1a1b1a1 – – EU052292 [13] EU259709 K1a1b1a1 – – EU259709 [13] EU170362 K1a1b1a1 – – EU170362 [13] EU523126 K1a1b1a1 – – EU523126 [14] JN990448 K1a1b1a1 – – JN990448 [15] JQ705979 K1a1b1a1 – – JQ705979 [3] JQ704812 K1a1b1a1 – – JQ704812 [3] JQ703308 K1a1b1a1 – – JQ703308 [3] JQ702245 K1a1b1a1 – – JQ702245 [3] JQ706006 K1a1b1a1 – – JQ706006 [3] JQ703485 K1a1b1a1 – – JQ703485 [3] JQ704216 K1a1b1a1 – – JQ704216 [3] GU585492 K1a1b1a1 – – GU585492 [7] EF657778 K1a1b1a1 Europe Europe EF657778 [12]a; [11]b EF657388 K1a1b1a1 Europe Europe EF657388 [12]a; [11]b EF657415 K1a1b1a1 Europe Europe EF657415 [12]a; [11]b EF657231 K1a1b1a1 Europe Europe EF657231 [12]a; [11]b EF657727 K1a1b1a1 Europe Europe EF657727 [12]a; [11]b EF657731 K1a1b1a1 Europe Europe EF657731 [12]a; [11]b EF657768 K1a1b1a1 Europe Europe EF657768 [12]a; [11]b EU862197 K1a1b1a1 Europe Europe EU862197 [14] JQ705204 K1a1b1a1 Europe Germany JQ705204 [3] JQ704654 K1a1b1a1 Europe Germany JQ704654 [3] JQ703855 K1a1b1a1 Europe Germany JQ703855 [3] JQ702155 K1a1b1a1 Europe Hungary JQ702155 [3] K70 K1a1b1a1 Europe Italy, Campania KC878724 [2] JQ702859 K1a1b1a1 Europe Lithuania JQ702859 [3] JQ702755 K1a1b1a1 Europe Poland JQ702755 [3] K55 K1a1b1a1 Europe Romania JX273256 [2] GU320192 K1a1b1a1 Europe Romania GU320192 [6] JQ703165 K1a1b1a1 Europe Russia JQ703165 [3] JQ702945 K1a1b1a1 Europe Russia - Ashkenazi Jew JQ702945 [3] EU327782 K1a1b1a1 Europe Ukraine EU327782 [13] JQ703662 K1a1b1a1 Europe Ukraine JQ703662 [3] DQ301795 K1a1b1a1 Jewish Ashkenazi Jew DQ301795 [11] DQ301803 K1a1b1a1 Jewish Ashkenazi Jew DQ301803 [11] DQ301805 K1a1b1a1 Jewish Ashkenazi Jew DQ301805 [11] DQ301802 K1a1b1a1 Jewish Ashkenazi Jew DQ301802 [11] DQ301789 K1a1b1a1 Jewish Ashkenazi Jew DQ301789 [11] DQ301813 K1a1b1a1 Jewish Ashkenazi Jew DQ301813 [11] JQ703069 K1a1b1a1 Jewish Ashkenazi Jew JQ703069 [3] JQ705951 K1a1b1a1 Jewish Ashkenazi Jew JQ705951 [3] GU723693 K1a1b1a1 Jewish Ashkenazi Jew GU723693 [7] HQ667591 K1a1b1a1 Jewish Ashkenazi Jew HQ667591 [7] JQ702780 K1a1b1a1 Jewish Ashkenazi Jew - Belarus JQ702780 [3] FJ938288 K1a1b1a1 Jewish Ashkenazi Jew - Belarus FJ938288 [6] JQ705745 K1a1b1a1 Jewish Ashkenazi Jew - Lithuania JQ705745 [3] JQ705016 K1a1b1a1 Jewish Ashkenazi Jew - Poland JQ705016 [3] FJ228404 K1a1b1a1 Jewish Ashkenazi Jew - Romania FJ228404 [14] JQ703012 K1a1b1a1 Jewish Ashkenazi Jew - Russia JQ703012 [3] JQ705568 K1a1b1a1 Jewish Ashkenazi Jew - Ukraine JQ705568 [3] JQ705628 K1a1b1a1 Jewish Ashkenazi Jew - Ukraine JQ705628 [3] JQ702671 K1a1b1a1 Jewish Ashkenazi Jew - Ukraine JQ702671 [3] JQ702676 K1a1b1a1 Jewish Ashkenazi Jew - Uzbekistan JQ702676 [3] GU571200 K1a1b1a1 Jewish German Jew GU571200 [7] GU722599 K1a1b1a1 Jewish German Jew GU722599 [7] HM054510 K1a1b1a1 Jewish Jew HM054510 [7] EU926147 K1a1b1a1 Jewish USA Jew EU926147 [14] HQ901176 K1a1b1a1 Jewish USA Jew HQ901176 [15] HM101136 K1a1b1a1 USA USA HM101136 [7] JQ702798 K1a1b1b Europe Britain JQ702798 [3] JQ702785 K1a1b1b Europe Britain JQ702785 [3] EF657764 K1a1b1b Europe Europe EF657764 [12]a; [11]b EF657243 K1a1b1b Europe Europe EF657243 [12]a; [11]b JQ702898 K1a1b1b Europe Ireland JQ702898 [3] JQ704983 K1a1b1b Europe Sweden JQ704983 [3] EU284179 K1a1b1c – – EU284179 [13] JQ702732 K1a1b1c Europe Belgium JQ702732 [3] EF657249 K1a1b1d Europe Europe EF657249 [12]a; [11]b JQ704096 K1a1b1d Europe Ireland JQ704096 [3] JQ702782 K1a1b1d Europe Ireland JQ702782 [3] JQ704056 K1a1b1e – – JQ704056 [3] JQ703805 K1a1b1e Europe Britain JQ703805 [3] EF657432 K1a1b1e Europe Europe EF657432 [12]a; [11]b JQ704207 K1a1b1e Europe Ireland JQ704207 [3] JQ706057 K1a1b1e Europe Italy JQ706057 [3] HQ176413 K1a1b1e Europe Italy HQ176413 [7] NA20505 K1a1b1e Europe Italy NA20505 [9] JX287343 K1a1b1e USA USA JX287343 [8] JQ703737 K1a1b1f Europe Britain JQ703737 [3] JX048065 K1a1b1f Europe England JX048065 [8] AY714044 K1a1b2a South Asia India AY714044 [19] HQ586011 K1a1b2a1 USA USA HQ586011 [7] JQ701858 K1a1b2a1a – – JQ701858 [3] JQ702665 K1a1b2a1a Europe Germany JQ702665 [3] NA20759 K1a1b2a1a Europe Italy NA20759 [9] HQ413154 K1a1b2a1a USA USA HQ413154 [7] JQ702624 K1a1b2b – – JQ702624 [3] JQ703073 K1a1b2b Europe Britain JQ703073 [3] JQ705697 K1a1c – – JQ705697 [3] JQ705454 K1a1c Europe Belgium JQ705454 [3] JQ702086 K1a1c Europe Britain JQ702086 [3] JQ703309 K1a2 – – JQ703309 [3] JN647926 K1a2 South Caucasus Armenia JN647926 [15] JQ706039 K1a20 South Caucasus Georgia JQ706039 [3] JQ706063 K1a20 Near East Turkey JQ706063 [3] JQ706059 K1a21 Europe Slovakia JQ706059 [3] HQ637410 K1a21 USA USA HQ637410 [7] JQ706042 K1a23 Near East Iran JQ706042 [3] JQ703522 K1a23 Near East Syria JQ703522 [3] JQ703891 K1a24 – – JQ703891 [3] K66 K1a24 Europe Italy KC878722 [2] JQ702717 K1a24a – – JQ702717 [3] JQ705218 K1a24a – – JQ705218 [3] JQ704924 K1a24a Europe Scotland JQ704924 [3] HM625696 K1a25 Europe Europe HM625696 [20] JQ706051 K1a25 Near East Lebanon JQ706051 [3] JQ705689 K1a26 Europe Britain JQ705689 [3] GU811147 K1a26 Europe Britain GU811147 [7] JQ704591 K1a26 Europe England JQ704591 [3] JQ705433 K1a26 Europe Ireland JQ705433 [3] AY882395 K1a26 Europe Italy AY882395 [4] JN415475 K1a27 Europe France JN415475 [36] JQ705460 K1a27 Near East Syria JQ705460 [3] K17 K1a28 Near East Israel-Palestine, Palestinian JX273252 [2] K16 K1a28 Near East Anatolia, Turkey JX273268 [2] HM852805 K1a28 South Caucasus Azerbaijan HM852805 [10] K23 K1a29 Europe Greece JX273262 [2] K24 K1a29 Near East Anatolia, Turkey JX273263 [2] JF303729 K1a29 South Caucasus Armenia JF303729 [15] EU849002 K1a2a – – EU849002 [14] JQ702031 K1a2a – – JQ702031 [3] JQ705354 K1a2a – – JQ705354 [3] JQ703581 K1a2a – – JQ703581 [3] JQ703041 K1a2a Europe Britain JQ703041 [3] JQ705456 K1a2a Europe Britain JQ705456 [3] HG00346 K1a2a Europe Finland HG00346 [9] JQ705620 K1a2a Europe Germany JQ705620 [3] HG01617 K1a2a Europe Iberia HG01617 [9] JQ705646 K1a2a Europe Poland JQ705646 [3] JQ703026 K1a2a Europe Scotland JQ703026 [3] JQ701856 K1a2a1 – – JQ701856 [3] NA06986 K1a2a1 Europe Europe NA06986 [9] NA20522 K1a2a1 Europe Italy NA20522 [9] JQ702748 K1a2a1 Europe Scotland JQ702748 [3] JQ704017 K1a2b – – JQ704017 [3] JQ706001 K1a2b – – JQ706001 [3] EU760854 K1a2b Europe England EU760854 [14] HM041971 K1a2b Europe France HM041971 [7] JQ702306 K1a2c – – JQ702306 [3] JQ703037 K1a2c – – JQ703037 [3] JQ705149 K1a2c Europe Finland JQ705149 [3] HM065508 K1a2d Europe Italy HM065508 [7] K61 K1a2d Near East Anatolia, Turkey KC878713 [2] AY495254 K1a2d USA USA AY495254 [16] EU330213 K1a3 – – EU330213 [13] JQ705784 K1a3 – – JQ705784 [3] HM021760 K1a3 Europe France HM021760 [7] JQ703347 K1a3 Europe Norway JQ703347 [3] JQ702705 K1a3 Europe Poland JQ702705 [3] JQ706044 K1a3 Near East Iran JQ706044 [3] K28 K1a3 Near East Iraq JX273278 [2] K30 K1a3 Near East Iraq JX273261 [2] K31 K1a3 Near East Israel, Druze JX273258 [2] K32 K1a3 Near East Israel-Palestine, Palestinian JX273254 [2] K29 K1a3 Near East Anatolia, Turkey JX273266 [2] K33 K1a3 North Caucasus Russia, Kabardian JX273282 [2] AY495264 K1a3 USA USA AY495264 [16] DQ523630 K1a30 Europe Sardinia DQ523630 [30] DQ523636 K1a30 Europe Sardinia DQ523636 [30] EF657597 K1a31 Europe Europe EF657597 [12]a; [11]b EF661004 K1a31 Europe Italy EF661004 [33] JQ701964 K1a3a – – JQ701964 [3] JQ703528 K1a3a – – JQ703528 [3] JQ705485 K1a3a Europe Germany JQ705485 [3] JQ702372 K1a3a Europe Ireland JQ702372 [3] HM598686 K1a3a USA USA HM598686 [7] JQ703096 K1a3a1 Europe France JQ703096 [3] JQ703648 K1a3a1 Europe Italy JQ703648 [3] JQ705841 K1a3a1 Europe Slovakia JQ705841 [3] DQ301814 K1a3a1 Jewish Moroccan Jew DQ301814 [11] JQ702348 K1a3a1b – – JQ702348 [3] HM640207 K1a3a1b – – HM640207 [7] GU799583 K1a3a1b Europe England GU799583 [7] EF657587 K1a3a1b Europe Europe EF657587 [12]a; [11]b AY495258 K1a3a1b USA USA AY495258 [16] JQ705957 K1a3a2 – – JQ705957 [3] JQ702693 K1a3a2 – – JQ702693 [3] AY495256 K1a3a2 USA USA AY495256 [16] JQ705192 K1a3a3 – – JQ705192 [3] HQ839861 K1a3a3 – – HQ839861 [7] JQ704830 K1a3a3 Europe Ireland JQ704830 [3] JQ701962 K1a3a3 Jewish British Jew JQ701962 [3] JQ703427 K1a3a4 Europe Britain JQ703427 [3] JQ703775 K1a3a4 Europe Norway JQ703775 [3] HQ610202 K1a3a4 USA USA HQ610202 [7] EU344156 K1a3a5 – – EU344156 [13] EU089746 K1a3a5 – – EU089746 [13] EU219921 K1a4 – – EU219921 [13] JQ703296 K1a4 – – JQ703296 [3] JQ705162 K1a4 – – JQ705162 [3] JQ702911 K1a4 – – JQ702911 [3] JQ703361 K1a4 – – JQ703361 [3] HG00121 K1a4 Europe Britain HG00121 [9] FJ348212 K1a4 Europe Hutterite FJ348212 [24] JQ705656 K1a4 Europe Switzerland JQ705656 [3] K67 K1a4 Near East Anatolia, Turkey KC878714 [2] K41 K1a4 Near East Syria JX273289 [2] K34 K1a4 Near East Anatolia, Turkey, Kurd JX273292 [2] K35 K1a4 Near East Anatolia, Turkey, Kurd JX273290 [2] K36 K1a4 North Caucasus Russia, Chechnya JX273272 [2] K40 K1a4 South Caucasus Azerbaijan JX273271 [2] AY495261 K1a4 USA USA AY495261 [16] AY495263 K1a4 USA USA AY495263 [16] EU603401 K1a4a – – EU603401 [14] JQ702521 K1a4a Europe Germany JQ702521 [3] JQ705100 K1a4a Jewish Ashkenazi-Levite JQ705100 [3] K69 K1a4a Near East Anatolia, Turkey KC878715 [2] K46 K1a4a North Caucasus Russia, Kabardian JX273281 [2] K47 K1a4a North Caucasus Russia, Kabardian JX273280 [2] EU616625 K1a4a1 – – EU616625 [14] JQ705661 K1a4a1 – – JQ705661 [3] JQ701835 K1a4a1 – – JQ701835 [3] JQ702315 K1a4a1 – – JQ702315 [3] JQ704078 K1a4a1 – – JQ704078 [3] JQ704109 K1a4a1 – – JQ704109 [3] HG01051 K1a4a1 America Puerto Rico HG01051 [9] JQ702744 K1a4a1 Europe Britain JQ702744 [3] JQ704320 K1a4a1 Europe Britain JQ704320 [3] JQ705229 K1a4a1 Europe England JQ705229 [3] HM045846 K1a4a1 Europe England HM045846 [7] EF657435 K1a4a1 Europe Europe EF657435 [12]a; [11]b JQ703704 K1a4a1 Europe France JQ703704 [3] JQ701994 K1a4a1 Europe Germany JQ701994 [3] JQ704092 K1a4a1 Europe Germany JQ704092 [3] JQ704727 K1a4a1 Europe Ireland JQ704727 [3] K68 K1a4a1 Europe North Italy KC878725 [2] JQ704770 K1a4a1 Europe Poland JQ704770 [3] JQ705785 K1a4a1 Europe Portugal JQ705785 [3] JQ702281 K1a4a1 Europe Spain JQ702281 [3] JQ705543 K1a4a1 Europe Spain JQ705543 [3] JQ704808 K1a4a1 Europe Sweden JQ704808 [3] JQ703493 K1a4a1 Europe Switzerland JQ703493 [3] FJ460525 K1a4a1 North Africa Tunisia FJ460525 [31] EU910091 K1a4a1 USA USA EU910091 [14] AY495262 K1a4a1 USA USA AY495262 [16] JQ340869 K1a4a1a – – JQ340869 [15] JQ704873 K1a4a1a – – JQ704873 [3] JQ703444 K1a4a1a – – JQ703444 [3] JQ705980 K1a4a1a – – JQ705980 [3] JQ702213 K1a4a1a – – JQ702213 [3] JQ702175 K1a4a1a – – JQ702175 [3] JQ702700 K1a4a1a Europe Denmark JQ702700 [3] HQ907958 K1a4a1a Europe England HQ907958 [15] JX047544 K1a4a1a Europe England JX047544 [8] EF657379 K1a4a1a Europe Europe EF657379 [12]a; [11]b EF657664 K1a4a1a Europe Europe EF657664 [12]a; [11]b AY495265 K1a4a1a USA USA AY495265 [16] JQ702811 K1a4a1a1 Europe Britain JQ702811 [3] JQ702773 K1a4a1a1 Europe Ireland JQ702773 [3] JQ703007 K1a4a1a1 Europe Ireland JQ703007 [3] JQ703168 K1a4a1a2 – – JQ703168 [3] JQ703212 K1a4a1a2 Europe Britain JQ703212 [3] JQ705714 K1a4a1a2 Europe Hungary JQ705714 [3] EU328539 K1a4a1a2a – – EU328539 [13] JQ705270 K1a4a1a2a – – JQ705270 [3] JQ703685 K1a4a1a2a – – JQ703685 [3] JQ705556 K1a4a1a2a Europe Croatia JQ705556 [3] EF657770 K1a4a1a2a Europe Europe EF657770 [12]a; [11]b GU361766 K1a4a1a2a USA USA GU361766 [6] JQ701810 K1a4a1a2b – – JQ701810 [3] JQ702238 K1a4a1a2b – – JQ702238 [3] JQ702896 K1a4a1a2b – – JQ702896 [3] JQ703880 K1a4a1a2b – – JQ703880 [3] EF657785 K1a4a1a2b Europe Europe EF657785 [12]a; [11]b HG00331 K1a4a1a2b Europe Finland HG00331 [9] JQ703763 K1a4a1a2b Europe France JQ703763 [3] JQ703782 K1a4a1a2b Europe Ireland JQ703782 [3] JQ702797 K1a4a1a2b Europe Sweden JQ702797 [3] GU123015 K1a4a1a3 Europe Russian Tatar GU123015 [5] GU122978 K1a4a1a3 Europe Russian Tatar GU122978 [5] GU371909 K1a4a1a3 USA USA GU371909 [6] EF464682 K1a4a1b – – EF464682 [13] JQ702610 K1a4a1b – – JQ702610 [3] JQ703407 K1a4a1b Europe England JQ703407 [3] EU677385 K1a4a1b1 – – EU677385 [14] GU971379 K1a4a1b1 – – GU971379 [7] JQ702779 K1a4a1b1 Europe England JQ702779 [3] GU191795 K1a4a1b1 Europe England GU191795 [6] EF657574 K1a4a1b1 Europe Europe EF657574 [12]a; [11]b JQ702471 K1a4a1b2 – – JQ702471 [3] JQ704948 K1a4a1b2 – – JQ704948 [3] JQ703171 K1a4a1b2 Europe Germany JQ703171 [3] EU692798 K1a4a1c – – EU692798 [14] JN258704 K1a4a1c Europe England JN258704 [15] EF657688 K1a4a1c Europe Europe EF657688 [12]a; [11]b JQ705215 K1a4a1c Europe Germany JQ705215 [3] JQ705558 K1a4a1d Europe Britain JQ705558 [3] JQ705404 K1a4a1d Europe Germany JQ705404 [3] AY495266 K1a4a1d USA USA AY495266 [16] JQ705938 K1a4a1e – – JQ705938 [3] EU597496 K1a4a1e Europe Basque EU597496 [18] JQ704526 K1a4a1e Europe Ireland JQ704526 [3] JQ705838 K1a4a1e Europe Ireland JQ705838 [3] JQ702341 K1a4a1e Europe Norway JQ702341 [3] JQ705816 K1a4a1f – – JQ705816 [3] JQ703548 K1a4a1f – – JQ703548 [3] HQ336048 K1a4a1f Europe Britain HQ336048 [7] HG00349 K1a4a1f Europe Finland HG00349 [9] JQ702760 K1a4a1f1 – – JQ702760 [3] JQ702302 K1a4a1f1 – – JQ702302 [3] HQ843088 K1a4a1f1 Europe England HQ843088 [7] JX127147 K1a4a1f1 Europe England JX127147 [8] JQ703807 K1a4a1g – – JQ703807 [3] JX048671 K1a4a1g Canada Canada JX048671 [8] JQ704759 K1a4a1g Europe France JQ704759 [3] K44 K1a4a1h Europe Russia, Chuvash JX273251 [2] K45 K1a4a1h Europe Russia, Chuvash JX273275 [2] HM852863 K1a4a1h Near East Anatolia, Turkey HM852863 [10] K43 K1a4a2 Near East Iraq JX273260 [2] K42 K1a4a2 Near East Israel-Palestine, Palestinian JX273253 [2] EU675299 K1a4b – – EU675299 [14] K37 K1a4b1 Near East Syria JX273287 [2] K38 K1a4b1a Europe Romania JX273257 [2] DQ301792 K1a4b1a Near East Druze DQ301792 [11] EU600366 K1a4b1a Near East Druze EU600366 [23] K39 K1a4b1a Near East Israel-Palestine, Palestinian JX273284 [2] DQ301809 K1a4c Near East Near East (Cherkes) DQ301809 [11] JQ706020 K1a4c1 – – JQ706020 [3] JQ703523 K1a4c1 Europe Italy JQ703523 [3] NA20530 K1a4c1 Europe Italy NA20530 [9] HQ538515 K1a4c1 South Caucasus Armenia HQ538515 [7] HQ435872 K1a4c1 South Caucasus Armenia HQ435872 [7] JQ703034 K1a4d – – JQ703034 [3] JQ702076 K1a4d – – JQ702076 [3] EU714298 K1a4d Europe England EU714298 [14] JQ703085 K1a4d Europe England JQ703085 [3] JQ705775 K1a4d Europe England JQ705775 [3] HM565771 K1a4d Europe England HM565771 [7] JQ701838 K1a4d Europe France JQ701838 [3] EU926621 K1a4d Europe German EU926621 [14] JQ703048 K1a4d Europe Germany JQ703048 [3] JQ704963 K1a4d Europe Germany JQ704963 [3] JQ704760 K1a4d Europe Germany JQ704760 [3] JQ705629 K1a4d Europe Ireland JQ705629 [3] JQ703025 K1a4d Europe Switzerland JQ703025 [3] AY495253 K1a4d USA USA AY495253 [16] AY495255 K1a4d USA USA AY495255 [16] AY495259 K1a4d USA USA AY495259 [16] JQ701973 K1a4e – – JQ701973 [3] JQ704761 K1a4e – – JQ704761 [3] JX294315 K1a4e Europe Britain JX294315 [8] EF657295 K1a4e Europe Europe EF657295 [12]a; [11]b GU722601 K1a4f – – GU722601 [7] K51 K1a4f Near East Iraq JX273277 [2] K52 K1a4f Near East Iraq JX273279 [2] K50 K1a4f Near East Anatolia, Turkey JX273267 [2] EF177416 K1a4f1 Europe Iberia EF177416 [22] NA20828 K1a4f1 Europe Italy NA20828 [9] JQ704764 K1a4f1 Europe Malta JQ704764 [3] K49 K1a4g Near East Anatolia, Turkey JX273269 [2] K48 K1a4g North Caucasus Adygea JX273270 [2] HM852890 K1a4g South Caucasus Georgia HM852890 [10] EU130551 K1a4h Europe Italy EU130551 [13] K53 K1a4h Europe Romania JX273285 [2] DQ301793 K1a5 Near East Druze DQ301793 [11] K21 K1a5a Europe Russia, Chuvash JX273274 [2] EU600367 K1a5a Near East Druze EU600367 [23] EU600368 K1a5a Near East Druze EU600368 [23] K18 K1a6 Near East Syria JX273288 [2] DQ301799 K1a6a Near East Druze DQ301799 [11] DQ301801 K1a6a Near East Druze DQ301801 [11] EU600369 K1a6a Near East Druze EU600369 [23] DQ301807 K1a7 Jewish Yemeni Jew DQ301807 [11] JQ706055 K1a7 Near East Saudi Arabia JQ706055 [3] JQ706029 K1a7 North Caucasus Avar JQ706029 [3] JQ702902 K1a8 – – JQ702902 [3] DQ301817 K1a8a Near East Saudi Arabia DQ301817 [11] K22 K1a8a1 Near East Israel-Palestine, Palestinian JX273255 [2] DQ301816 K1a8a1 Near East Lebanon DQ301816 [11] DQ301818 K1a8a1 Near East Syria DQ301818 [11] JQ706043 K1a8b Near East Iran JQ706043 [3] JQ706052 K1a8b Near East Lebanon JQ706052 [3] JQ706061 K1a8b Near East Syria JQ706061 [3] JQ704944 K1a9 – – JQ704944 [3] JQ705017 K1a9 – – JQ705017 [3] JQ702100 K1a9 – – JQ702100 [3] JQ702586 K1a9 – – JQ702586 [3] JQ702066 K1a9 – – JQ702066 [3] JQ702192 K1a9 – – JQ702192 [3] JQ702508 K1a9 – – JQ702508 [3] JQ702512 K1a9 – – JQ702512 [3] JQ702540 K1a9 Europe Belarus JQ702540 [3] K59 K1a9 Europe Bulgaria KC878723 [2] EF657751 K1a9 Europe Europe EF657751 [12]a; [11]b EF657583 K1a9 Europe Europe EF657583 [12]a; [11]b JQ702117 K1a9 Europe Russia JQ702117 [3] GU295448 K1a9 Europe Russia GU295448 [6] JQ703651 K1a9 Europe Ukraine JQ703651 [3] DQ301790 K1a9 Jewish Ashkenazi Jew DQ301790 [11] DQ301791 K1a9 Jewish Ashkenazi Jew DQ301791 [11] DQ301806 K1a9 Jewish Ashkenazi Jew DQ301806 [11] DQ301808 K1a9 Jewish Ashkenazi Jew DQ301808 [11] JQ703075 K1a9 Jewish Ashkenazi Jew JQ703075 [3] JQ704228 K1a9 Jewish Ashkenazi Jew JQ704228 [3] JQ705026 K1a9 Jewish Ashkenazi Jew JQ705026 [3] JQ702745 K1b1a1 – – JQ702745 [3] JQ703130 K1b1a1 – – JQ703130 [3] JQ705400 K1b1a1 Europe Britain JQ705400 [3] GU722600 K1b1a1 Europe Britain GU722600 [7] JQ705225 K1b1a1 Europe Denmark JQ705225 [3] GU797785 K1b1a1 Europe England GU797785 [7] EF657521 K1b1a1 Europe Europe EF657521 [12]a; [11]b EF657513 K1b1a1 Europe Europe EF657513 [12]a; [11]b NA11892 K1b1a1 Europe Europe NA11892 [9] JQ703008 K1b1a1 Europe Germany JQ703008 [3] JX891380 K1b1a1 Europe Ireland JX891380 [8] JQ705686 K1b1a1 Europe Sweden JQ705686 [3] JQ701895 K1b1a1a – – JQ701895 [3] JQ702168 K1b1a1a – – JQ702168 [3] JQ705685 K1b1a1a – – JQ705685 [3] JQ704057 K1b1a1a – – JQ704057 [3] JQ702919 K1b1a1a – – JQ702919 [3] JX091694 K1b1a1a Europe England JX091694 [8] EF657385 K1b1a1b Europe Europe EF657385 [12] JQ702752 K1b1a1b Europe Italy JQ702752 [3] JQ702304 K1b1a1c – – JQ702304 [3] GU361772 K1b1a1c Europe Germany GU361772 [6] KC158584 K1b1a1c Europe Scotland KC158584 [8] EU239477 K1b1a1c USA USA EU239477 [13] EF177415 K1b1a2 Europe Iberia EF177415 [22] EU714300 K1b1a2 Europe Portugal EU714300 [14] JQ703194 K1b1a2 Europe Portugal JQ703194 [3] JQ703412 K1b1b – – JQ703412 [3] DQ301800 K1b1b Jewish Yemeni Jew DQ301800 [11] AY495260 K1b1b USA USA AY495260 [16] JQ703003 K1b1c – – JQ703003 [3] GU455378 K1b1c Europe England GU455378 [7] K56 K1b1c Near East Anatolia, Turkey KC878716 [2] K57 K1b1c Near East Anatolia, Turkey KC878717 [2] HM852812 K1b1c South Caucasus Azerbaijan HM852812 [10] EU600370 K1b1c Near East Druze EU600370 [23] K11 K1b1c Near East Israel, Druze JX273293 [2] DQ301810 K1b1c Near East Palestinian DQ301810 [11] JQ705257 K1b2a – – JQ705257 [3] JQ705467 K1b2a Europe Finland JQ705467 [3] JQ703378 K1b2a Europe Ireland JQ703378 [3] JQ703033 K1b2a Europe Scotland JQ703033 [3] HM852763 K1b2a South Caucasus Armenia HM852763 [10] GU362081 K1b2a USA USA GU362081 [6] FJ348210 K1b2a1 Europe Hutterite FJ348210 [24] JQ703969 K1b2a1 Europe Slovenia JQ703969 [3] HQ000094 K1b2a1 USA USA HQ000094 [7] JQ705289 K1b2a1a – – JQ705289 [3] JQ705103 K1b2a1a1 – – JQ705103 [3] JQ705246 K1b2a1a1 – – JQ705246 [3] JQ705519 K1b2a1a1 Europe Britain JQ705519 [3] JQ702926 K1b2a1a1 Europe Sweden JQ702926 [3] EU372659 K1b2a2 – – EU372659 [14] JQ774501 K1b2a2 – – JQ774501 [8] JQ705044 K1b2a2 Europe Germany JQ705044 [3] JQ705736 K1b2a2 Europe Ireland JQ705736 [3] K58 K1b2a2 Near East Anatolia, Turkey KC878718 [2] JQ702325 K1b2a2a – – JQ702325 [3] JQ702636 K1b2a2a – – JQ702636 [3] JQ702849 K1b2a2a Europe Poland JQ702849 [3] EU849091 K1b2a2a Europe Sweden EU849091 [14] EU621708 K1b2a3 – – EU621708 [14] K12 K1b2a3 Europe France JX273244 [2] JQ703021 K1b2a3 Europe Germany JQ703021 [3] AF382005 K1b2b Europe Iberia AF382005 [25] EF428259 K1b2b1 – – EF428259 [13] JQ703876 K1b2b1 – – JQ703876 [3] JQ703665 K1b2b1 – – JQ703665 [3] EF657780 K1b2b1 Europe Europe EF657780 [12]a; [11]b K13 K1b2b1 Europe France JX273245 [2] JQ703206 K1b2b1 Europe Scotland JQ703206 [3] JQ705771 K1b2b1 Europe Spain JQ705771 [3] JQ702810 K1b2b1 Europe Spain JQ702810 [3] JQ820100 K1b2b1 USA USA JQ820100 [8] EU157918 K1c1 – – EU157918 [13] JQ702722 K1c1 – – JQ702722 [3] JQ703189 K1c1 – – JQ703189 [3] JQ703695 K1c1 – – JQ703695 [3] JQ704836 K1c1 – – JQ704836 [3] JQ705010 K1c1 – – JQ705010 [3] JQ702148 K1c1 Europe Britain JQ702148 [3] JQ702618 K1c1 Europe Britain JQ702618 [3] K14 K1c1 Europe Czech Republic JX273276 [2] GU936958 K1c1 Europe England GU936958 [7] HM625702 K1c1 Europe Europe HM625702 [20] JQ702133 K1c1 Europe Finland JQ702133 [3] EF177407 K1c1 Europe Iberia EF177407 [22] HM032895 K1c1 Europe Ireland HM032895 [7] JQ705131 K1c1 Europe Netherlands JQ705131 [3] JQ705481 K1c1 Europe Poland JQ705481 [3] GU585491 K1c1 Europe Scotland GU585491 [7] K15 K1c1 Europe Sicily JX273248 [2] JQ705520 K1c1 Europe Spain JQ705520 [3] EF657449 K1c1a Europe Europe EF657449 [12]a; [11]b AY882394 K1c1a Europe Italy AY882394 [4] HM851442 K1c1a USA USA HM851442 [7] EU677421 K1c1b – – EU677421 [14] JQ702452 K1c1b – – JQ702452 [3] JQ702851 K1c1b – – JQ702851 [3] JQ702908 K1c1b – – JQ702908 [3] JQ705869 K1c1b – – JQ705869 [3] JQ703487 K1c1b – – JQ703487 [3] JQ702333 K1c1b Europe Britain JQ702333 [3] JQ705781 K1c1b Europe Denmark JQ705781 [3] HQ454119 K1c1b Europe England HQ454119 [7] HM594675 K1c1b Europe England HM594675 [7] AY195765 K1c1b Europe Europe AY195765 [26] JQ703261 K1c1b Europe France JQ703261 [3] HM474856 K1c1b Europe Germany HM474856 [7] JQ703054 K1c1b Europe Ireland JQ703054 [3] GU371910 K1c1b Europe Ireland GU371910 [6] AY495250 K1c1b USA USA AY495250 [16] AY495251 K1c1b USA USA AY495251 [16] AY495243 K1c1b USA USA AY495243 [16] EU262720 K1c1c – – EU262720 [13] EU753433 K1c1c Europe Finland EU753433 [14] JQ703696 K1c1c Europe Finland JQ703696 [3] JQ703860 K1c1c Europe Finland JQ703860 [3] HG00177 K1c1c Europe Finland HG00177 [9] HG00326 K1c1c Europe Finland HG00326 [9] HG00185 K1c1c Europe Finland HG00185 [9] KC170989 K1c1c Europe Russia KC170989 [8] JQ703292 K1c1d – – JQ703292 [3] JQ705406 K1c1d Europe Germany JQ705406 [3] JQ705772 K1c1e – – JQ705772 [3] JQ702901 K1c1e Europe Poland JQ702901 [3] JQ702905 K1c1e Europe Romania JQ702905 [3] GU123011 K1c1e Europe Russian Tatar GU123011 [5] JQ703815 K1c1f Europe Germany JQ703815 [3] HQ398201 K1c1f Europe Slovakia HQ398201 [7] AY495245 K1c1f USA USA AY495245 [16] GU722602 K1c1g Europe England GU722602 [7] HQ108165 K1c1g Europe England HQ108165 [7] HQ011278 K1c1g USA USA HQ011278 [7] JQ702977 K1c2 – – JQ702977 [3] JQ705173 K1c2 – – JQ705173 [3] JQ702555 K1c2 – – JQ702555 [3] JQ702861 K1c2 – – JQ702861 [3] JQ704904 K1c2 – – JQ704904 [3] JQ702944 K1c2 – – JQ702944 [3] JQ703044 K1c2 – – JQ703044 [3] JQ703124 K1c2 – – JQ703124 [3] JQ705178 K1c2 – – JQ705178 [3] JQ705821 K1c2 – – JQ705821 [3] JQ705994 K1c2 – – JQ705994 [3] JQ705317 K1c2 – – JQ705317 [3] FJ608581 K1c2 Australia Australia FJ608581 [6] HM245922 K1c2 Canada Canada HM245922 [7] JQ701845 K1c2 Europe Britain JQ701845 [3] EU669889 K1c2 Europe Denmark EU669889 [14] JQ702632 K1c2 Europe England JQ702632 [3] JQ704729 K1c2 Europe England JQ704729 [3] EF657350 K1c2 Europe Europe EF657350 [12]a; [11]b EF657564 K1c2 Europe Europe EF657564 [12]a; [11]b HM625683 K1c2 Europe Europe HM625683 [20] JQ703200 K1c2 Europe Germany JQ703200 [3] JQ703095 K1c2 Europe Germany JQ703095 [3] JQ706007 K1c2 Europe Germany JQ706007 [3] JQ702129 K1c2 Europe Ireland JQ702129 [3] JQ703679 K1c2 Europe Ireland JQ703679 [3] GU323604 K1c2 Europe Ireland GU323604 [6] HQ342147 K1c2 Europe Ireland HQ342147 [7] HM149346 K1c2 Europe Ireland HM149346 [7] JQ704737 K1c2 Europe Poland JQ704737 [3] JQ703159 K1c2 Europe Scotland JQ703159 [3] JQ704951 K1c2 Europe Scotland JQ704951 [3] JQ703019 K1c2 Europe Scotland JQ703019 [3] JQ703067 K1c2 Europe Scotland JQ703067 [3] DQ301797 K1c2 Jewish Moroccan Jew DQ301797 [11] JQ706028 K1c2 North Caucasus North Caucasus JQ706028 [3] EU664585 K1c2 USA USA EU664585 [14] JN620369 K1c2 USA USA JN620369 [15] HQ538516 K1c2 USA USA HQ538516 [7] DQ830736 K1c2a – – DQ830736 [27] JQ703122 K1c2a – – JQ703122 [3] JQ705291 K1c2a Europe Ireland JQ705291 [3] JQ705122 K1c2a Europe Ireland JQ705122 [3] JQ704724 K1d – – JQ704724 [3] JQ702883 K1d – – JQ702883 [3] DQ112750 K1d Australia Australia DQ112750 [28] JQ702254 K1d Europe Britain JQ702254 [3] JQ705538 K1e Europe Britain JQ705538 [3] EU073969 K1e1 – – EU073969 [13] JQ705063 K1e1 Europe Ireland JQ705063 [3] EU810403 K1f Europe Tyrolean Iceman (aDNA) EU810403 [29] EU259094 K2a – – EU259094 [13] JQ702111 K2a – – JQ702111 [3] JQ704625 K2a – – JQ704625 [3] JQ701884 K2a – – JQ701884 [3] JQ702887 K2a – – JQ702887 [3] JQ703726 K2a – – JQ703726 [3] GU565530 K2a – – GU565530 [7] JQ703050 K2a Europe England JQ703050 [3] JQ705452 K2a Europe England JQ705452 [3] EF657453 K2a Europe Europe EF657453 [12]a; [11]b EF657576 K2a Europe Europe EF657576 [12]a; [11]b EF657273 K2a Europe Europe EF657273 [12]a; [11]b EF657602 K2a Europe Europe EF657602 [12]a; [11]b EF657687 K2a Europe Europe EF657687 [12]a; [11]b NA12005 K2a Europe Europe NA12005 [9] JQ703752 K2a Europe Germany JQ703752 [3] JQ704879 K2a Europe Hungary JQ704879 [3] JN541065 K2a Europe Irish/German JN541065 [15] K10 K2a Europe Russia, Chuvash JX273273 [2] JQ705611 K2a Europe Spain JQ705611 [3] EU130564 K2a Europe Sweden EU130564 [13] AY495241 K2a USA USA AY495241 [16] AY495247 K2a USA USA AY495247 [16] HM194602 K2a USA USA HM194602 [7] EF657610 K2a1 Europe Europe EF657610 [12]a; [11]b DQ301815 K2a1 Jewish Algerian Jew DQ301815 [11] JQ702134 K2a10 – – JQ702134 [3] JQ703553 K2a10 Europe France JQ703553 [3] JQ702771 K2a11 – – JQ702771 [3] HM804486 K2a11 – – HM804486 [7] HG01334 K2a11 Europe Britain HG01334 [9] EU884127 K2a11 Europe England EU884127 [14] JQ665461 K2a2 – – JQ665461 [8] JQ704822 K2a2 Europe France JQ704822 [3] AY495246 K2a2 USA USA AY495246 [16] HQ154135 K2a2a Europe Germany HQ154135 [7] EU327986 K2a2a1 – – EU327986 [13] JQ702429 K2a2a1 Europe Belarus JQ702429 [3] EF657526 K2a2a1 Europe Europe EF657526 [12]a; [11]b JQ703072 K2a2a1 Europe Poland JQ703072 [3] JQ701811 K2a2a1 Europe Russia JQ701811 [3] JQ703629 K2a2a1 Europe Russia JQ703629 [3] HQ914446 K2a2a1 Europe Ukraine HQ914446 [15] DQ301812 K2a2a1 Jewish Ashkenazi Jew DQ301812 [11] DQ301804 K2a2a1 Jewish Ashkenazi Jew DQ301804 [11] HM347598 K2a2a1 Jewish Ashkenazi Jew HM347598 [7] JQ705090 K2a2a1 Jewish Ashkenazi Jew - Belarus JQ705090 [3] JQ704707 K2a3 – – JQ704707 [3] JQ703837 K2a3 – – JQ703837 [3] JQ702353 K2a3 Europe Britain JQ702353 [3] HG00236 K2a3 Europe Britain HG00236 [9] JQ703039 K2a3 Europe France JQ703039 [3] JQ703146 K2a3 Europe Netherlands JQ703146 [3] HQ189135 K2a3 Europe Netherlands HQ189135 [7] HQ658476 K2a3 Europe Sweden HQ658476 [7] AY495252 K2a3 USA USA AY495252 [16] JQ703540 K2a3a1 – – JQ703540 [3] HM625707 K2a3a1 Europe Europe HM625707 [20] JN867338 K2a3a1 USA USA JN867338 [15] AY495249 K2a3a1 USA USA AY495249 [16] HQ246214 K2a3a1 USA USA HQ246214 [7] JQ705156 K2a4 – – JQ705156 [3] JQ702920 K2a4 – – JQ702920 [3] JQ664545 K2a4 Europe Croatia JQ664545 [17] EF657244 K2a4 Europe Europe EF657244 [12]a; [11]b AY495242 K2a4 USA USA AY495242 [16] JQ703318 K2a5 – – JQ703318 [3] JX021502 K2a5 Europe Germany JX021502 [8] JQ703018 K2a5 Europe Ireland JQ703018 [3] K9 K2a5 Near East Anatolia, Turkey JX273250 [2] AY714017 K2a5 South Asia India AY714017 [19] EU597528 K2a5 South Asia Pakistan EU597528 [18] JQ704076 K2a5a – – JQ704076 [3] EU718789 K2a5a1 Europe England EU718789 [14] JQ704843 K2a5a1 Europe Portugal JQ704843 [3] JQ703521 K2a6 – – JQ703521 [3] JQ702373 K2a6 – – JQ702373 [3] JQ702417 K2a6 – – JQ702417 [3] JQ703049 K2a6 – – JQ703049 [3] JQ705059 K2a6 – – JQ705059 [3] JQ705805 K2a6 – – JQ705805 [3] JQ705301 K2a6 – – JQ705301 [3] KC209782 K2a6 – – KC209782 [8] JX414172 K2a6 – – JX414172 [8] FJ644290 K2a6 Canada Canada FJ644290 [6] JQ703534 K2a6 Europe Britain JQ703534 [3] JQ704662 K2a6 Europe England JQ704662 [3] JQ705073 K2a6 Europe England JQ705073 [3] HQ224515 K2a6 Europe England HQ224515 [7] JQ703300 K2a6 Europe Germany JQ703300 [3] HQ413155 K2a6 Europe Germany HQ413155 [7] HQ213857 K2a6 Europe Ireland HQ213857 [7] FJ492878 K2a6 USA USA FJ492878 [14] AY495239 K2a6 USA USA AY495239 [16] AY495240 K2a6 USA USA AY495240 [16] AY495244 K2a6 USA USA AY495244 [16] AY495248 K2a6 USA USA AY495248 [16] EU284177 K2a7 – – EU284177 [13] JQ704912 K2a7 – – JQ704912 [3] JQ703136 K2a7 Europe Britain JQ703136 [3] JQ702640 K2a7 Europe France JQ702640 [3] JQ702380 K2a7 Europe Germany JQ702380 [3] NA20756 K2a8 Europe Italy NA20756 [9] JQ705029 K2a8 Europe Spain JQ705029 [3] DQ282493 K2a8 USA USA DQ282493 [21] DQ282494 K2a8 USA USA DQ282494 [21] DQ282495 K2a8 USA USA DQ282495 [21] DQ282496 K2a8 USA USA DQ282496 [21] DQ282497 K2a8 USA USA DQ282497 [21] DQ282498 K2a8 USA USA DQ282498 [21] DQ282499 K2a8 USA USA DQ282499 [21] DQ282500 K2a8 USA USA DQ282500 [21] DQ282501 K2a8 USA USA DQ282501 [21] DQ282502 K2a8 USA USA DQ282502 [21] DQ282504 K2a8 USA USA DQ282504 [21] DQ282503 K2a8 USA USA DQ282503 [21] JQ701808 K2a9 – – JQ701808 [3] JQ705829 K2a9 Europe Italy JQ705829 [3] JQ702282 K2a9 Europe Lithuania JQ702282 [3] JQ704070 K2b – – JQ704070 [3] K8 K2b Europe Sicily JX273249 [2] EU294321 K2b1 – – EU294321 [13] JQ701883 K2b1 – – JQ701883 [3] JQ704933 K2b1 – – JQ704933 [3] JQ703038 K2b1 Europe Britain JQ703038 [3] JQ703184 K2b1 Europe Britain JQ703184 [3] JX847130 K2b1 Europe Britain JX847130 [8] HG00243 K2b1 Europe Britain HG00243 [9] HG00128 K2b1 Europe Britain HG00128 [9] EF657477 K2b1 Europe Europe EF657477 [12]a; [11]b JQ702075 K2b1 Europe Germany JQ702075 [3] K7 K2b1 Near East Iraq JX273246 [2] EU825946 K2b1a – – EU825946 [14] JQ704004 K2b1a – – JQ704004 [3] JQ703859 K2b1a Europe Belgium JQ703859 [3] EU669888 K2b1a Europe Britain EU669888 [14] JQ702033 K2b1a Europe Britain JQ702033 [3] JQ702487 K2b1a Europe Britain JQ702487 [3] JQ703066 K2b1a Europe Britain JQ703066 [3] EF657643 K2b1a Europe Europe EF657643 [12]a; [11]b JQ703767 K2b1a Europe Germany JQ703767 [3] JQ705469 K2b1a Europe Germany JQ705469 [3] JQ705092 K2b1a Europe Germany JQ705092 [3] JQ702754 K2b1a Europe Ireland JQ702754 [3] JQ703001 K2b1a Europe Netherlands JQ703001 [3] JQ705327 K2b1a1 – – JQ705327 [3] EU770310 K2b1a1 Europe England EU770310 [14] JN202493 K2b1a1 Europe England JN202493 [15] JQ272844 K2b1a1 Europe England JQ272844 [15] JQ702805 K2b1a1 Europe England JQ702805 [3] JQ703375 K2b1a1 Europe England JQ703375 [3] EF657628 K2b1a1 Europe Europe EF657628 [12]a; [11]b EF657493 K2b1a1 Europe Europe EF657493 [12]a; [11]b EF657647 K2b1a1 Europe Europe EF657647 [12]a; [11]b JQ702131 K2b1a1 Europe Finland JQ702131 [3] JN409346 K2b1a1 Europe Germany JN409346 [8] JQ702394 K2b1a1 Europe Ireland JQ702394 [3] JQ703064 K2b2 – – JQ703064 [3] JQ704900 K2b2 – – JQ704900 [3] JQ702672 K2b2 Europe England JQ702672 [3] JQ703197 K2b2 Europe Germany JQ703197 [3] JQ704064 K2b2 Europe Germany JQ704064 [3] K6 K2c Europe Sardinia JX273247 [2] DQ301796 K2c Jewish Yemeni Jew DQ301796 [11] JQ702759 U8a – – JQ702759 [3] HG00263 U8a1 Europe Britain HG00263 [9] JQ611709 U8a1 USA USA JQ611709 [3] JQ702930 U8a1a – – JQ702930 [3] DQ200802 U8a1a Europe Basque DQ200802 [1] K1 U8a1a Europe Spain, Basque JX273297 [2] JQ705347 U8a1a1 – – JQ705347 [3] JQ704769 U8a1a1 – – JQ704769 [3] JQ705653 U8a1a1 Europe Czech Republic JQ705653 [3] JQ704775 U8a1a1 Europe Finland JQ704775 [3] JQ704964 U8a1a1 Europe Finland JQ704964 [3] AY882392 U8a1a1 Europe Iberia AY882392 [4] GU123022 U8a1a1 Europe Russian Tatar GU123022 [5] JQ704011 U8a1a1a – – JQ704011 [3] DQ200803 U8a1a1a Europe Basque DQ200803 [1] GU299344 U8a1a1a Europe England GU299344 [6] JQ705819 U8a1a1a Europe Sweden JQ705819 [3] JQ705281 U8a1a1a Europe Switzerland JQ705281 [3] K2 U8a1a1b Europe Russia, Chuvash JX273295 [2] JQ703779 U8a1a1b1 Europe Finland JQ703779 [3] JQ705346 U8a1a1b1 Europe Finland JQ705346 [3] JQ702812 U8a1a1b1 Europe Finland JQ702812 [3] HQ022823 U8a1a1b1 Europe Finland HQ022823 [7] HG00176 U8a1a1b1 Europe Finland HG00176 [9] JQ702203 U8a1a1b1 Europe Russia JQ702203 [3] HM008694 U8a1a1b1 Europe Sweden HM008694 [7] JQ703046 U8a1a2 – – JQ703046 [3] HM113490 U8a1a2 Europe Britain HM113490 [7] JQ702761 U8a1a2 Europe Switzerland JQ702761 [3] JX297480 U8a1a3 Canada Canada JX297480 [8] HQ336423 U8a1a3 Europe France/Germany HQ336423 [7] DQ200801 U8a2 Europe Basque DQ200801 [1] JQ702141 U8a2 Europe Britain JQ702141 [3] KC521459 U8b Europe Dolni Vestonice 13, Czech Republic (aDNA) KC521459 [37] HM590366 U8b1a1 – – HM590366 [7] AY882393 U8b1a1 Europe Italy AY882393 [4] HM852759 U8b1a1 South Caucasus Armenia HM852759 [10] DQ200805 U8b1a2 Near East Jordan DQ200805 [1] K3 U8b1a2 North Africa Algeria JX273296 [2] K4 U8b1a2 North Caucasus Russia, Kabardian JX273294 [2] JQ705831 U8b1b – – JQ705831 [3] K5 U8b1b Near East Iraq JX273243 [2] HM050402 U8b1b1 – – HM050402 [7] JQ705815 U8b1b1 Europe Germany JQ705815 [3] NA20786 U8b1b1 Europe Italy NA20786 [9] JQ704970 U8b1b1 Europe Norway JQ704970 [3] GQ360037 U8b1b1 USA USA GQ360037 [6] Supplementary Data 3.2 N1b2 mitogenomes sequenced in the present study. Sequence ID MtDNA haplogroup Region Country/Ethnicity GenBank ID References TOR941 N1b2 Europe Lombardy KF297808 [2] TOR942 N1b2 Europe Sardinia KF297809 [2] (a) mtDNA coding region (b) mtDNA control region References 1. Gonzalez, A.M., Garcia, O., Larruga, J.M., and Cabrera, V.M. (2006). The mitochondrial lineage U8a reveals a Paleolithic settlement in the Basque country. BMC Genomics 7, 124. 2. Present study. 3. Behar, D.M., van Oven, M., Rosset, S., Metspalu, M., Loogvali, E.L., Silva, N.M., Kivisild, T., Torroni, A., and Villems, R. (2012). A "Copernican" reassessment of the human mitochondrial DNA tree from its root. Am J Hum Genet 90, 675-684. 4. Achilli, A., Rengo, C., Battaglia, V., Pala, M., Olivieri, A., Fornarino, S., Magri, C., Scozzari, R., Babudri, N., Santachiara-Benerecetti, A.S., et al. (2005). Saami and Berbers--an unexpected mitochondrial DNA link. Am J Hum Genet 76, 883-886. 5. Malyarchuk, B., Derenko, M., Denisova, G., and Kravtsova, O. (2010). 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Complete mitochondrial genome sequences for 265 African American and U.S. "Hispanic" individuals. Forensic Sci Int Genet 2, e45-48. 22. Pereira, L., Gonçalves, J., Franco-Duarte, R., Silva, J., Rocha, T., Arnold, C., Richards, M., and Macaulay, V. (2007). No Evidence for an mtDNA Role in Sperm Motility: Data from Complete Sequencing of Asthenozoospermic Males. Molecular Biology and Evolution 24, 868-874. 23. Shlush, L.I., Behar, D.M., Yudkovsky, G., Templeton, A., Hadid, Y., Basis, F., Hammer, M., Itzkovitz, S., and Skorecki, K. (2008). The Druze: a population genetic refugium of the Near East. PloS one 3, e2105. 24. Pichler, I., Fuchsberger, C., Platzer, C., Caliskan, M., Marroni, F., Pramstaller, P.P., and Ober, C. (2010). Drawing the history of the Hutterite population on a genetic landscape: inference from Y-chromosome and mtDNA genotypes. Eur J Hum Genet 18, 463-470. 25. Maca-Meyer, N., Gonzalez, A.M., Larruga, J.M., Flores, C., and Cabrera, V.M. (2001). Major genomic mitochondrial lineages delineate early human expansions. BMC Genet 2, 13. 26. Mishmar, D., Ruiz-Pesini, E., Golik, P., Macaulay, V., Clark, A.G., Hosseini, S., Brandon, M., Easley, K., Chen, E., Brown, M.D., et al. (2003). Natural selection shaped regional mtDNA variation in humans. Proceedings of the National Academy of Sciences 100, 171-176. 27. Hurst, W & Greenspan, B. (2006). FTDNA Direct submission. GenBank. 28. Kivisild, T., Shen, P., Wall, D.P., Do, B., Sung, R., Davis, K., Passarino, G., Underhill, P.A., Scharfe, C., Torroni, A., et al. (2006). The role of selection in the evolution of human mitochondrial genomes. Genetics 172, 373-387. 29. Ermini, L., Olivieri, C., Rizzi, E., Corti, G., Bonnal, R., Soares, P., Luciani, S., Marota, I., De Bellis, G., Richards, M.B., et al. (2008). Complete mitochondrial genome sequence of the Tyrolean Iceman. Curr Biol 18, 1687-1693. 30. Fraumene, C., Belle, E.M., Castri, L., Sanna, S., Mancosu, G., Cosso, M., Marras, F., Barbujani, G., Pirastu, M., and Angius, A. (2006). High resolution analysis and phylogenetic network construction using complete mtDNA sequences in sardinian genetic isolates. Mol Biol Evol 23, 2101-2111. 31. Costa, M.D., Cherni, L., Fernandes, V., Freitas, F., Ammar El Gaaied, A.B., and Pereira, L. (2009). Data from complete mtDNA sequencing of Tunisian centenarians: testing haplogroup association and the "golden mean" to longevity. Mech Ageing Dev 130, 222-226. 32. Pope, A.M., Carr, S.M., Smith, K.N., and Marshall, H.D. (2011). Mitogenomic and microsatellite variation in descendants of the founder population of Newfoundland: high genetic diversity in an historically isolated population. Genome 54, 110-119. 33. Gasparre, G., Porcelli, A.M., Bonora, E., Pennisi, L.F., Toller, M., Iommarini, L., Ghelli, A., Moretti, M., Betts, C.M., Martinelli, G.N., et al. (2007). Disruptive mitochondrial DNA mutations in complex I subunits are markers of oncocytic phenotype in thyroid tumors. Proc Natl Acad Sci U S A 104, 9001-9006. 34. Liu, J. (2012). DNA Direct submission. GenBank. 35. Perego, U.A. (2010). GeneTree & Sorenson Molecular Genealogy Direct submission. GenBank. 36. Achilli, A., Iommarini, L., Olivieri, A., Pala, M., Hooshiar Kashani, B., Reynier, P., La Morgia, C., Valentino, M.L., Liguori, R., Pizza, F., et al. (2012). Rare primary mitochondrial DNA mutations and probable synergistic variants in Leber's hereditary optic neuropathy. PLoS One 7, e42242. 37. Fu, Q., Mittnik, A., Johnson, Philip L.F., Bos, K., Lari, M., Bollongino, R., Sun, C., Giemsch, L., Schmitz, R., Burger, J., et al. (2013). A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes. Current Biology 23, 553-559.